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IDENTIFICATION OF A STRUCTURALLY NOVEL BTK MUTATION THAT DRIVES IBRUTINIB RESISTANCE IN CLL BUT NOT RICHTER TRANSFORMATION
Author(s): ,
Y Lynn Wang
Affiliations:
Pathology,University of Chicago,Chicago,United States
,
Shruti Sharma
Affiliations:
Pathology,University of Chicago,Chicago,United States
,
Natalie Galanina
Affiliations:
Medicine,University of Chicago,Chicago,United States
,
Ailin Guo
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Jimmy Lee
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Sabah Kadri
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States;Center for Research Informatics,University of Chicago,Chicago,United States
,
Charles Van Slambrouck
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Bradley Long
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Weige Wang
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Mei Ming
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Larissa Furtado
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Jeremy Segal
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Wendy Stock
Affiliations:
Department of Medicine,University of Chicago,Chicago,United States
,
Girish Venkataraman
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
,
Wei-Jen Tang
Affiliations:
Ben-May Department for Cancer Research,University of Chicago,Chicago,United States
Pin Lu
Affiliations:
Department of Pathology,University of Chicago,Chicago,United States
(Abstract release date: 05/19/16) EHA Library. Wang L. 06/09/16; 132583; E1034
Prof. Lynn Wang
Prof. Lynn Wang
Contributions
Abstract
Abstract: E1034

Type: Eposter Presentation

Background
Ibrutinib (ibr), a first-in-class Bruton tyrosine kinase (BTK) inhibitor, has demonstrated high response rates in both relapsed/refractory and treatment naïve chronic lymphocytic leukemia (CLL). However, about 25% of patients discontinue ibrutinib therapy at a median follow-up of 20 months and many patients discontinue the treatment due to leukemia progression or Richter transformation. Mutations affecting the C481 residue of BTK disrupt ibrutinib binding and have been characterized by us and others as the most common mechanism of ibrutinib resistance.  In addition, BTK mutations have been found in several Richter-transformed patients treated with ibr. In these patients, it is not clear whether BTK mutations are related to Richter transformation or ibr treatment or both. 

Aims
As the use of ibr becomes more prevalent in CLL and other types of non-Hodgkin lymphoma (NHL), more patients are expected to develop resistance. Thus, a complete understanding of the mechanisms of ibr resistance is important for the development of strategies to prevent and treat ibrutinib resistance. 

Methods
Serial samples were collected from a Richter transformed CLL patient who were treated with ibrutinib, responded and then relapsed.  The samples were analyzed using Onco1K, a 1,200-gene next-gen sequencing panel with an average sequencing depth of 420x. The uncovered novel mutation was then validated with Sanger sequencing and characterized with structural modeling. The role of the mutation was further functionally defined with cell transfection followed by assays for cell-proliferation, BrdU-incorporation, and intracellular B-cell receptor signaling.

Results
A structurally novel mutation of Bruton tyrosine kinase was identified which was associated with CLL relapse but not Richter transformation.  Functionally, cells carrying the mutant BTK show resistance to ibrutinib at both cellular and molecular levels to a similar extent as BTKC481S

Conclusion
Our study lends further insight into the diverse mechanisms of ibrutinib resistance that has important implications for the development of next-generation BTK inhibitors as well as mutation detection in relapsed patients.

Session topic: E-poster

Keyword(s): Chronic lymphocytic leukemia, Genetic, Mutation
Abstract: E1034

Type: Eposter Presentation

Background
Ibrutinib (ibr), a first-in-class Bruton tyrosine kinase (BTK) inhibitor, has demonstrated high response rates in both relapsed/refractory and treatment naïve chronic lymphocytic leukemia (CLL). However, about 25% of patients discontinue ibrutinib therapy at a median follow-up of 20 months and many patients discontinue the treatment due to leukemia progression or Richter transformation. Mutations affecting the C481 residue of BTK disrupt ibrutinib binding and have been characterized by us and others as the most common mechanism of ibrutinib resistance.  In addition, BTK mutations have been found in several Richter-transformed patients treated with ibr. In these patients, it is not clear whether BTK mutations are related to Richter transformation or ibr treatment or both. 

Aims
As the use of ibr becomes more prevalent in CLL and other types of non-Hodgkin lymphoma (NHL), more patients are expected to develop resistance. Thus, a complete understanding of the mechanisms of ibr resistance is important for the development of strategies to prevent and treat ibrutinib resistance. 

Methods
Serial samples were collected from a Richter transformed CLL patient who were treated with ibrutinib, responded and then relapsed.  The samples were analyzed using Onco1K, a 1,200-gene next-gen sequencing panel with an average sequencing depth of 420x. The uncovered novel mutation was then validated with Sanger sequencing and characterized with structural modeling. The role of the mutation was further functionally defined with cell transfection followed by assays for cell-proliferation, BrdU-incorporation, and intracellular B-cell receptor signaling.

Results
A structurally novel mutation of Bruton tyrosine kinase was identified which was associated with CLL relapse but not Richter transformation.  Functionally, cells carrying the mutant BTK show resistance to ibrutinib at both cellular and molecular levels to a similar extent as BTKC481S

Conclusion
Our study lends further insight into the diverse mechanisms of ibrutinib resistance that has important implications for the development of next-generation BTK inhibitors as well as mutation detection in relapsed patients.

Session topic: E-poster

Keyword(s): Chronic lymphocytic leukemia, Genetic, Mutation

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